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alberteng's solution

to RNA Transcription in the Elm Track

Published at Jul 13 2020 · 0 comments
Instructions
Test suite
Solution

Note:

This exercise has changed since this solution was written.

Given a DNA strand, return its RNA complement (per RNA transcription).

Both DNA and RNA strands are a sequence of nucleotides.

The four nucleotides found in DNA are adenine (A), cytosine (C), guanine (G) and thymine (T).

The four nucleotides found in RNA are adenine (A), cytosine (C), guanine (G) and uracil (U).

Given a DNA strand, its transcribed RNA strand is formed by replacing each nucleotide with its complement:

  • G -> C
  • C -> G
  • T -> A
  • A -> U

Elm Installation

Refer to the Installing Elm page for information about installing elm.

Writing the Code

The first time you start an exercise, you'll need to ensure you have the appropriate dependencies installed. Thankfully, Elm makes that easy for you and will install dependencies when you try to run tests or build the code.

Execute the tests with:

$ elm-test

Automatically run tests again when you save changes:

$ elm-test --watch

As you work your way through the test suite, be sure to remove the skip <| calls from each test until you get them all passing!

Source

Hyperphysics http://hyperphysics.phy-astr.gsu.edu/hbase/Organic/transcription.html

Submitting Incomplete Solutions

It is possible to submit an incomplete solution so you can see how others have completed the exercise.

Tests.elm

module Tests exposing (tests)

import Expect
import RNATranscription exposing (toRNA)
import Test exposing (..)


tests : Test
tests =
    describe "RNATranscription"
        [ test "complement of cytosine is guanine" <|
            \() -> Expect.equal (Ok "G") (toRNA "C")
        , skip <|
            test "complement of guanine is cytosine" <|
                \() -> Expect.equal (Ok "C") (toRNA "G")
        , skip <|
            test "complement of thymine is adenine" <|
                \() -> Expect.equal (Ok "A") (toRNA "T")
        , skip <|
            test "complement of adenine is uracil" <|
                \() -> Expect.equal (Ok "U") (toRNA "A")
        , skip <|
            test "complement" <|
                \() -> Expect.equal (Ok "UGCACCAGAAUU") (toRNA "ACGTGGTCTTAA")
        ]
module RNATranscription exposing (toRNA)


convertStrand : Char -> Char
convertStrand dna =
    if dna == 'G' then
        'C'

    else if dna == 'C' then
        'G'

    else if dna == 'T' then
        'A'

    else if dna == 'A' then
        'U'

    else
        '_'


toRNA : String -> Result String String
toRNA dna =
    let
        converted =
            String.map convertStrand dna
    in
    if String.contains "_" converted then
        Err "INVALID DNA SEQUENCE"

    else
        Ok converted

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